3U86 Transcription date Oct 15, 2011
title Crystal Structure Of Human Menin In Complex With Jund
authors J.Huang, B.Wan, M.Lei
compound source
Molecule: Menin
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Men1, Scg2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid

Molecule: Transcription Factor Jun-D
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jund
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 41 21 2
R_factor 0.217 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.647 140.647 93.106 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.84 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe same pocket in menin binds both MLL and JUND but has opposite effects on transcription., Huang J, Gurung B, Wan B, Matkar S, Veniaminova NA, Wan K, Merchant JL, Hua X, Lei M, Nature. 2012 Feb 12;482(7386):542-6. doi: 10.1038/nature10806. PMID:22327296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (3u86.pdb1.gz) 78 Kb
  • CSU: Contacts of Structural Units for 3U86
  • Structure Factors (162 Kb)
  • Retrieve 3U86 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U86 from S2C, [Save to disk]
  • Re-refined 3u86 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3U86 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3U86
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3U86, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u86] [3u86_B] [3u86_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3U86
  • Community annotation for 3U86 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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