3UBB	Hydrolase Inhibitor	date	Oct 24, 2011
title	The Crystal Structure Of Glpg In Complex With A Phosphonoflu Inhibitor
authors	Y.Xue, Y.Ha
compound		source
Molecule: Rhomboid Protease Glpg Chain: A Fragment: Unp Residues 91-272 Synonym: Intramembrane Serine Protease Ec: 3.4.21.105 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Glpg, B3424, Jw5687 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet41b
symmetry	Space Group: H 3 2	R_factor 0.211 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 111.722 111.722 121.810 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	3UB	enzyme	Hydrolase E.C.3.4.21.105 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Conformational Change in Rhomboid Protease GlpG Induced by Inhibitor Binding to Its S' Subsites., Xue Y, Chowdhury S, Liu X, Akiyama Y, Ellman J, Ha Y, Biochemistry. 2012 May 8;51(18):3723-31. Epub 2012 Apr 24. PMID:22515733

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk] Biological Unit Coordinates (3ubb.pdb1.gz) 30 Kb Biological Unit Coordinates (3ubb.pdb2.gz) 88 Kb LPC: Ligand-Protein Contacts for 3UBB CSU: Contacts of Structural Units for 3UBB Structure Factors (148 Kb) Retrieve 3UBB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UBB from S2C, [Save to disk] Re-refined 3ubb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UBB in 3D

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Visual 3D analysis of 3UBB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UBB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ubb_A] [3ubb] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3UBB

Community annotation for 3UBB at PDBWiki (http://pdbwiki.org)

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