3UE7 Unknown Function date Oct 28, 2011
title X-Ray Crystal Structure Of A Novel Topological Analogue Of C
authors K.Mandal, B.L.Pentelute, D.Bang, Z.P.Gates, V.Y.Torbeev, S.B.H.Ke
compound source
Molecule: D-Crambin
Chain: A
Fragment: D-Crambin
Engineered: Yes
Synthetic: Yes
Other_details: Chemical Synthesis

Molecule: Crambin
Chain: B
Fragment: L-Crambin Topological Analogue
Engineered: Yes

Synthetic: Yes
Organism_scientific: Crambe Hispanica Subsp. Abyssinica
Organism_common: Abyssinian Crambe,Abyssinian Kale
Organism_taxid: 3721
Other_details: Chemical Synthesis
symmetry Space Group: P 1 21 1
R_factor 0.144 R_Free 0.176
crystal
cell
length a length b length c angle alpha angle beta angle gamma
26.447 43.901 28.716 90.00 108.68 90.00
method X-Ray Diffractionresolution 1.08 Å
ligand DAL, DAR, DAS, DCY, DGL, DIL, DLE, DPN, DPR, DSG, DSN, DTH, DTY, DVA enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceDesign, total chemical synthesis, and x-ray structure of a protein having a novel linear-loop polypeptide chain topology., Mandal K, Pentelute BL, Bang D, Gates ZP, Torbeev VY, Kent SB, Angew Chem Int Ed Engl. 2012 Feb 6;51(6):1481-6. doi:, 10.1002/anie.201107846. Epub 2011 Dec 30. PMID:22213444
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (3ue7.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (3ue7.pdb2.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 3UE7
  • CSU: Contacts of Structural Units for 3UE7
  • Structure Factors (299 Kb)
  • Retrieve 3UE7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UE7 from S2C, [Save to disk]
  • Re-refined 3ue7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UE7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UE7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UE7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ue7_B] [3ue7] [3ue7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UE7
  • Community annotation for 3UE7 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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