3UI4 Isomerase date Nov 04, 2011
title 0.8 A Resolution Crystal Structure Of Human Parvulin 14
authors J.W.Mueller, N.M.Link, A.Matena, L.Hoppstock, A.Rueppel, P.Bayer, W.Blankenfeldt
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Nima-Interact
Chain: A
Synonym: Parvulin-14, Par14, Hpar14, Parvulin-17, Par17, Hp Peptidyl-Prolyl Cis-Trans Isomerase Pin4, Ppiase Pin4, Pept Prolyl Cistrans Isomerase Epvh, Hepvh, Rotamase Pin4;
Ec: 5.2.1.8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pin4, Q9y237
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-41
symmetry Space Group: P 21 21 21
R_factor 0.095 R_Free 0.098
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.043 46.966 51.826 90.00 90.00 90.00
method X-Ray Diffractionresolution 0.80 Å
ligand CL, SO4 enzyme Isomerase E.C.5.2.1.8 BRENDA
note 3UI4 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystallographic Proof for an Extended Hydrogen-Bonding Network in Small Prolyl Isomerases., Mueller JW, Link NM, Matena A, Hoppstock L, Ruppel A, Bayer P, Blankenfeldt W, J Am Chem Soc. 2011 Nov 21. PMID:22081960
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (3ui4.pdb1.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 3UI4
  • CSU: Contacts of Structural Units for 3UI4
  • Structure Factors (568 Kb)
  • Retrieve 3UI4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UI4 from S2C, [Save to disk]
  • Re-refined 3ui4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UI4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UI4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UI4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ui4_A] [3ui4]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UI4
  • Community annotation for 3UI4 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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