3V43 Transferase Structural Protein date Dec 14, 2011
title Crystal Structure Of Moz
authors Y.Qiu, F.Li
compound source
Molecule: Histone Acetyltransferase Kat6a
Chain: A
Fragment: Unp Residues 204-313
Synonym: Moz, Ybf2sas3, Sas2 And Tip60 Protein 3, Myst-3, Leukemia Zinc Finger Protein, Runt-Related Transcription Fa Binding Protein 2, Zinc Finger Protein 220;
Ec: 2.3.1.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kat6a, Moz, Myst3, Runxbp2, Znf220
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a

Molecule: Histone H3.1
Chain: Q
Fragment: Unp Residues 2-19
Synonym: Histone H3a, Histone H3b, Histone H3c, Histone Histone H3f, Histone H3h, Histone H3i, Histone H3j, His Histone H3l;
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: The Peptide Was Chemically Synthesized.
symmetry Space Group: P 21 21 21
R_factor 0.153 R_Free 0.176
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.080 57.630 76.510 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.47 Å
ligand ACT, ZN enzyme Transferase E.C.2.3.1.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Q


Primary referenceCombinatorial readout of unmodified H3R2 and acetylated H3K14 by the tandem PHD finger of MOZ reveals a regulatory mechanism for HOXA9 transcription., Qiu Y, Liu L, Zhao C, Han C, Li F, Zhang J, Wang Y, Li G, Mei Y, Wu M, Wu J, Shi Y, Genes Dev. 2012 Jun 15;26(12):1376-91. doi: 10.1101/gad.188359.112. PMID:22713874
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (3v43.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3V43
  • CSU: Contacts of Structural Units for 3V43
  • Structure Factors (588 Kb)
  • Retrieve 3V43 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V43 from S2C, [Save to disk]
  • Re-refined 3v43 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3V43 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3V43
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V43, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v43_Q] [3v43_A] [3v43]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3V43: [PHD] [RING ] by SMART
  • Other resources with information on 3V43
  • Community annotation for 3V43 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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