3V6A	Apoptosis Inhibitor	date	Dec 19, 2011
title	Helical Repeat Structure Of Apoptosis Inhibitor 5 Reveals Pr Protein Interaction Modules
authors	B.I.Lee, B.G.Han, S.J.Lee
compound		source
Molecule: Apoptosis Inhibitor 5 Chain: A Fragment: Unp Residues 1-454 Synonym: Api-5, Antiapoptosis Clone 11 Protein, Aac-11, Cel Migration-Inducing Gene 8 Protein, Fibroblast Growth Factor Interacting Factor, Fif, Protein Xagl; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Api5 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28b(+)
symmetry	Space Group: P 21 21 21	R_factor 0.213 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.376 88.615 136.988 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
Primary reference	Helical repeat structure of apoptosis inhibitor 5 reveals protein-protein interaction modules., Han BG, Kim KH, Lee SJ, Jeong KC, Cho JW, Noh KH, Kim TW, Kim SJ, Yoon HJ, Suh SW, Lee S, Lee BI, J Biol Chem. 2012 Mar 30;287(14):10727-37. doi: 10.1074/jbc.M111.317594. Epub, 2012 Feb 12. PMID:22334682

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (3v6a.pdb1.gz) 69 Kb CSU: Contacts of Structural Units for 3V6A Structure Factors (263 Kb) Retrieve 3V6A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3V6A from S2C, [Save to disk] Re-refined 3v6a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V6A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3V6A

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3V6A, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v6a_A] [3v6a] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3V6A

Community annotation for 3V6A at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---