3VLN Transferase date Dec 02, 2011
title Human Glutathione Transferase O1-1 C32s Mutant In Complex Wi Ascorbic Acid
authors J.Brock, P.G.Board, A.J.Oakley
compound source
Molecule: Glutathione S-Transferase Omega-1
Chain: A
Synonym: Gsto-1
Ec: 2.5.1.18
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsto1, Gsttlp28
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phue
symmetry Space Group: P 31 2 1
R_factor 0.180 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.918 56.918 140.511 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.70 Å
ligand ACT, ASC, EDO, GOL, SO4 enzyme Transferase E.C.2.5.1.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • glutathione dehydrogenase (a...
  • negative regulation of ryano...
  • positive regulation of ryano...

  • Primary referenceStructural Insights into the Dehydroascorbate Reductase Activity of Human Omega-Class Glutathione Transferases., Zhou H, Brock J, Liu D, Board PG, Oakley AJ, J Mol Biol. 2012 Apr 18. PMID:22522127
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (3vln.pdb1.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 3VLN
  • CSU: Contacts of Structural Units for 3VLN
  • Structure Factors (402 Kb)
  • Retrieve 3VLN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VLN from S2C, [Save to disk]
  • Re-refined 3vln structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VLN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3VLN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3VLN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vln_A] [3vln]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3VLN
  • Community annotation for 3VLN at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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