3VSW	Hydrolase Hydrolase Inhibitor	date	May 11, 2012
title	Human Renin In Complex With Compound 8
authors	M.Takahashi, H.Hanzawa
compound		source
Molecule: Renin Chain: A, B Synonym: Angiotensinogenase Ec: 3.4.23.15 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ren Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: 293f Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdna3.1
symmetry	Space Group: P 21 3	R_factor 0.235 R_Free 0.309
crystal cell	length a length b length c angle alpha angle beta angle gamma 140.762 140.762 140.762 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	NAG, R31	enzyme	Hydrolase E.C.3.4.23.15 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Design and optimization of novel (2S,4S,5S)-5-amino-6-(2,2-dimethyl-5-oxo-4-phenylpiperazin-1-yl)-4-hydroxy-2-isop ropylhexanamides as renin inhibitors., Nakamura Y, Sugita C, Meguro M, Miyazaki S, Tamaki K, Takahashi M, Nagai Y, Nagayama T, Kato M, Suemune H, Nishi T, Bioorg Med Chem Lett. 2012 Jul 15;22(14):4561-6. Epub 2012 Jun 4. PMID:22726934

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk] Biological Unit Coordinates (3vsw.pdb1.gz) 55 Kb Biological Unit Coordinates (3vsw.pdb2.gz) 55 Kb Biological Unit Coordinates (3vsw.pdb3.gz) 314 Kb Biological Unit Coordinates (3vsw.pdb4.gz) 159 Kb Biological Unit Coordinates (3vsw.pdb5.gz) 159 Kb LPC: Ligand-Protein Contacts for 3VSW CSU: Contacts of Structural Units for 3VSW Structure Factors (155 Kb) Retrieve 3VSW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VSW from S2C, [Save to disk] Re-refined 3vsw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VSW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3VSW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3VSW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vsw_B] [3vsw_A] [3vsw] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3VSW

Community annotation for 3VSW at PDBWiki (http://pdbwiki.org)

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