3WEH Transferase date Jul 07, 2013
title Crystal Structure Of The Human Squalene Synthase In Complex Presqualene Pyrophosphate
authors C.I.Liu, W.Y.Jeng, A.H.J.Wang
compound source
Molecule: Squalene Synthase
Chain: A
Fragment: Unp Residues 31-370
Synonym: Sqs, Ss, Fpp:Fpp Farnesyltransferase, Farnesyl-Dip Farnesyltransferase;
Ec: 2.5.1.21
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fdft1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl-21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 21 21 21
R_factor 0.165 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.235 93.876 108.803 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.87 Å
ligand MG, PS7 enzyme Transferase E.C.2.5.1.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (3weh.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 3WEH
  • CSU: Contacts of Structural Units for 3WEH
  • Structure Factors (437 Kb)
  • Retrieve 3WEH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WEH from S2C, [Save to disk]
  • Re-refined 3weh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3WEH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3WEH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3WEH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3weh] [3weh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3WEH
  • Community annotation for 3WEH at PDBWiki (http://pdbwiki.org)

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