3WHQ Hydrolase, Transferase date Aug 30, 2013
title Crystal Structure Of Gamma-Glutamyltranspeptidase From Bacil Subtilis (Crystal Soaked For 0 Min. In Acivicin Soln. )
authors K.Wada, K.Fukuyama
compound source
Molecule: Gamma-Glutamyltranspeptidase Large Chain
Chain: A
Synonym: L-Subunit Of Gamma-Glutamyltranspeptidase
Ec: 2.3.2.2, 3.4.19.13
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 224308
Strain: 168
Gene: Ggt, Bsu18410
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcold-I

Molecule: Gamma-Glutamyltranspeptidase Small Chain
Chain: B
Synonym: S-Subunit Of Gamma-Glutamyltranspeptidase
Ec: 2.3.2.2, 3.4.19.13
Engineered: Yes

Organism_scientific: Bacillus Subtilis
Organism_taxid: 224308
Strain: 168
Gene: Ggt, Bsu18410
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcold-I
symmetry Space Group: P 21 21 21
R_factor 0.176 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.633 71.664 143.746 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand
enzyme Transferase E.C.2.3.2.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (3whq.pdb1.gz) 91 Kb
  • CSU: Contacts of Structural Units for 3WHQ
  • Structure Factors (640 Kb)
  • Retrieve 3WHQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WHQ from S2C, [Save to disk]
  • Re-refined 3whq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3WHQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3WHQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3WHQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3whq_A] [3whq] [3whq_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3WHQ
  • Community annotation for 3WHQ at PDBWiki (http://pdbwiki.org)

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