3ZMP	Hydrolase Peptide	date	Feb 12, 2013
title	Src-Derived Peptide Inhibitor Complex Of Ptp1b
authors	K.Temmerman, V.Pogenberg, C.Meyer, M.Koehn, M.Wilmanns
compound		source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 1 Chain: A, B Fragment: Tyrosine-Protein Phosphatase Domain, Residues 1-3 Synonym: Protein-Tyrosine Phosphatase 1b, Ptp-1b Ec: 3.1.3.48 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src Chain: C, D Fragment: Residues 527-536 Synonym: Src-Derived Peptide, Proto-Oncogene C-Src, Pp60c-S Src; Ec: 2.7.10.2 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 21 21 21	R_factor 0.220 R_Free 0.271
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.820 88.070 91.991 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.62 Å
ligand	FTY	enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Development of Accessible Peptidic Tool Compounds To Study the Phosphatase PTP1B in Intact Cells., Meyer C, Hoeger B, Temmerman K, Tatarek-Nossol M, Pogenberg V, Bernhagen J, Wilmanns M, Kapurniotu A, Kohn M, ACS Chem Biol. 2014 Jan 15. PMID:24387659

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk] Biological Unit Coordinates (3zmp.pdb1.gz) 90 Kb Biological Unit Coordinates (3zmp.pdb2.gz) 90 Kb LPC: Ligand-Protein Contacts for 3ZMP CSU: Contacts of Structural Units for 3ZMP Structure Factors (626 Kb) Retrieve 3ZMP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZMP from S2C, [Save to disk] Re-refined 3zmp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZMP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZMP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZMP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zmp_A] [3zmp_D] [3zmp] [3zmp_C] [3zmp_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ZMP: [PTPc ] by SMART

Other resources with information on 3ZMP

Community annotation for 3ZMP at PDBWiki (http://pdbwiki.org)

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