4A09 | Dna-Binding Protein Dna | date | Sep 08, 2011 |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex (Puri Position) At 3.1 A Resolution (Cpd 2) | ||||||||||||||
authors | A.Scrima, E.S.Fischer, S.Iwai, H.Gut, N.H.Thoma | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna Damage-Binding Protein 1 Chain: A Synonym: Ddb P127 Subunit, Dna Damage-Binding Protein A, Dd Damage-Specific Dna-Binding Protein 1, Hbv X-Associated Pro Xap-1, Uv-Damaged Dna-Binding Factor, Uv-Damaged Dna-Bindin 1, Uv-Ddb 1, Xpe-Binding Factor, Xpe-Bf, Xeroderma Pigmento E-Complementing Protein, Xpce; Engineered: Yes Mutation: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: High Five Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac Derived | ||||||||||||||
Molecule: Dna Damage-Binding Protein 2 Chain: B Fragment: Residues 60-423 Synonym: Damage-Specific Dna-Binding Protein 2 Engineered: Yes |
Organism_scientific: Danio Rerio Organism_common: Zebrafish Organism_taxid: 7955 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: High Five Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac Derived | ||||||||||||||
Molecule: 5'-D(Gpgptpgpapapap(Ttd)Papgpcpapgp Chain: G Engineered: Yes Other_details: Damaged Strand. Contains Cyclobutane Pyrimid (Cpd); |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||
Molecule: 5'-D(Cpcptpgpcptpcpcptptptpcpapcpc Chain: H Engineered: Yes Other_details: Undamaged Strand |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||
symmetry | Space Group: P 21 21 21 |
| |||||||||||||
crystal cell |
| ||||||||||||||
method | X-Ray Diffraction | resolution | 3.10 Å | ||||||||||||
ligand | CA, TTD | enzyme |
| ||||||||||||
Gene Ontology |
| ||||||||||||||
Primary reference | The Molecular Basis of CRL4(DDB2/CSA) Ubiquitin Ligase Architecture, Targeting, and Activation., Fischer ES, Scrima A, Bohm K, Matsumoto S, Lingaraju GM, Faty M, Yasuda T, Cavadini S, Wakasugi M, Hanaoka F, Iwai S, Gut H, Sugasawa K, Thoma NH, Cell. 2011 Nov 23;147(5):1024-39. PMID:22118460 |
Data retrieval |
View 4A09 in 3D |
Visual 3D analysis of 4A09 |
Structure-derived information |
Sequence-derived information |
Other resources with information on 4A09 |
Movements, Movies and Images |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |