4A7G	Oxidoreductase	date	Nov 14, 2011
title	Structure Of Human I113t Sod1 Mutant Complexed With 4-Methyl 1-Yl)Quinazoline In The P21 Space Group.
authors	G.S.A.Wright, N.M.Kershaw, R.Sharma, S.V.Antonyuk, R.W.Strange, N P.M.O'Neil, S.S.Hasnain
compound		source
Molecule: Superoxide Dismutase [Cu-Zn] Chain: A Synonym: Superoxide Dismutase-1, Superoxide Dismutase 1, Hs Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet303
Molecule: Superoxide Dismutase [Cu-Zn] Chain: F Synonym: Superoxide Dismutase-1, Superoxide Dismutase 1, Hs Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet303
symmetry	Space Group: P 1 21 1	R_factor 0.139 R_Free 0.175
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.793 68.352 49.920 90.00 104.49 90.00
method	X-Ray Diffraction	resolution	1.24 Å
ligand	12I, ACT, CU, SO4, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
Gene Ontology	Chain Function Process Component F, A superoxide dismutase activit... protein binding anterograde axonal transport... retrograde axonal transport
Primary reference	X-ray Crystallography and Computational Docking for the Detection and Development of Protein-Ligand Interactions., Kershaw NM, Wright GS, Sharma R, Antonyuk SV, Strange RW, Berry NG, O'Neill PM, Hasnain SS, Curr Med Chem. 2013 Feb 1;20(4):569-75. PMID:23278398

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk] Biological Unit Coordinates (4a7g.pdb1.gz) 117 Kb LPC: Ligand-Protein Contacts for 4A7G CSU: Contacts of Structural Units for 4A7G Structure Factors (3473 Kb) Retrieve 4A7G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4A7G from S2C, [Save to disk] Re-refined 4a7g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4A7G in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4A7G

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4A7G, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4a7g_F] [4a7g] [4a7g_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4A7G

Community annotation for 4A7G at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---