4A7Q Oxidoreductase date Nov 14, 2011
title Structure Of Human I113t Sod1 Mutant Complexed With 4-(4- Methyl-1,4-Diazepan-1-Yl)Quinazoline In The P21 Space Group.
authors G.S.A.Wright, N.M.Kershaw, R.Sharma, S.V.Antonyuk, R.W.Strange, N P.M.Oneil, S.S.Hasnain
compound source
Molecule: Superoxide Dismutase [Cu-Zn]
Chain: A, F
Synonym: Superoxide Dismutase-1, Superoxide Dismutase 1, Hs
Ec: 1.15.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet303
symmetry Space Group: P 1 21 1
R_factor 0.12488 R_Free 0.15925
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.010 68.210 49.010 90.00 104.11 90.00
method X-Ray Diffractionresolution 1.22 Å
ligand 4MQ, CU, SO4, ZN enzyme Oxidoreductase E.C.1.15.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A
  • superoxide dismutase activit...
  • protein binding
  • anterograde axonal transport...
  • retrograde axonal transport

  • Primary referenceX-ray Crystallography and Computational Docking for the Detection and Development of Protein-Ligand Interactions., Kershaw NM, Wright GS, Sharma R, Antonyuk SV, Strange RW, Berry NG, O'Neill PM, Hasnain SS, Curr Med Chem. 2013 Feb 1;20(4):569-75. PMID:23278398
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (4a7q.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 4A7Q
  • CSU: Contacts of Structural Units for 4A7Q
  • Structure Factors (409 Kb)
  • Retrieve 4A7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4A7Q from S2C, [Save to disk]
  • Re-refined 4a7q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4A7Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4a7q] [4a7q_A] [4a7q_F]
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