4A97 Transport Protein date Nov 24, 2011
title X-Ray Structure Of A Pentameric Ligand Gated Ion Channel Fro Chrysanthemi (Elic) In Complex With Zopiclone
authors R.Spurny, M.Brams, C.Ulens
compound source
Molecule: Cys-Loop Ligand-Gated Ion Channel
Chain: A, B, C, D, E, F, G, H, I, J
Fragment: Residues 11-316
Synonym: Elic
Engineered: Yes
Organism_scientific: Erwinia Chrysanthemi
Organism_taxid: 556
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.205 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.400 266.830 110.760 90.00 109.20 90.00
method X-Ray Diffractionresolution 3.34 Å
ligand ZPC enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, E, B, H, C, D, I, G


Primary referencePentameric ligand-gated ion channel ELIC is activated by GABA and modulated by benzodiazepines., Spurny R, Ramerstorfer J, Price K, Brams M, Ernst M, Nury H, Verheij M, Legrand P, Bertrand D, Bertrand S, Dougherty DA, de Esch IJ, Corringer PJ, Sieghart W, Lummis SC, Ulens C, Proc Natl Acad Sci U S A. 2012 Oct 3. PMID:23035248
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1072 Kb) [Save to disk]
  • Biological Unit Coordinates (4a97.pdb1.gz) 535 Kb
  • Biological Unit Coordinates (4a97.pdb2.gz) 535 Kb
  • LPC: Ligand-Protein Contacts for 4A97
  • CSU: Contacts of Structural Units for 4A97
  • Structure Factors (680 Kb)
  • Retrieve 4A97 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4A97 from S2C, [Save to disk]
  • Re-refined 4a97 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4A97 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4A97
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4A97, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4a97_J] [4a97_G] [4a97_D] [4a97] [4a97_C] [4a97_H] [4a97_I] [4a97_E] [4a97_F] [4a97_B] [4a97_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4A97
  • Community annotation for 4A97 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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