4ABK	Transferase	date	Dec 08, 2011
title	Human Parp14 (Artd8, Bal2) - Macro Domain 3 In Complex With 5-Diphosphoribose
authors	T.Karlberg, M.Moche, A.G.Thorsell, C.H.Arrowsmith, C.Bountra, A.M T.Ekblad, J.Weigelt, H.Schuler
compound		source
Molecule: Poly [Adp-Ribose] Polymerase 14 Chain: A Fragment: Macro Domain 3, Residues 1208-1388 Synonym: Adp-Ribose Transferase, Parp-14, B Aggressive Lymp Protein 2; Ec: 2.4.2.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: R3 Prare Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic-Bsa4
symmetry	Space Group: P 21 21 21	R_factor 0.166 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 32.949 41.253 108.538 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	AR6	enzyme	Transferase E.C.2.4.2.30 BRENDA
Primary reference	Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains., Forst AH, Karlberg T, Herzog N, Thorsell AG, Gross A, Feijs KL, Verheugd P, Kursula P, Nijmeijer B, Kremmer E, Kleine H, Ladurner AG, Schuler H, Luscher B, Structure. 2013 Mar 5;21(3):462-75. doi: 10.1016/j.str.2012.12.019. PMID:23473667

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (4abk.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 4ABK CSU: Contacts of Structural Units for 4ABK Structure Factors (127 Kb) Retrieve 4ABK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4ABK from S2C, [Save to disk] Re-refined 4abk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ABK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4ABK

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4ABK, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4abk] [4abk_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4ABK: [A1pp ] by SMART

Other resources with information on 4ABK

Community annotation for 4ABK at PDBWiki (http://pdbwiki.org)

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