4AC0 Transcription date Dec 12, 2011
title Tetr(B) In Complex With Minocycline And Magnesium
authors G.Volkers, W.Hinrichs
compound source
Molecule: Tetracycline Repressor Protein Class B From Trans 0;
Chain: A
Synonym: Tetracycline Repressor Class B
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.234 R_Free 0.294
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.880 71.880 93.430 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand MG, MIY, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (4ac0.pdb1.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 4AC0
  • CSU: Contacts of Structural Units for 4AC0
  • Structure Factors (147 Kb)
  • Retrieve 4AC0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AC0 from S2C, [Save to disk]
  • Re-refined 4ac0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4AC0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4AC0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AC0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ac0] [4ac0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4AC0
  • Community annotation for 4AC0 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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