4ACG Transferase date Dec 15, 2011
title Gsk3b In Complex With Inhibitor
authors Y.Xue, M.Ormo
compound source
Molecule: Glycogen Synthase Kinase-3 Beta
Chain: A, B
Synonym: Gsk-3 Beta, Serinethreonine-Protein Kinase Gsk3b,
Ec: 2.7.11.1, 2.7.11.26
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_vector_type: Plasmid
Expression_system_vector: Pfastbac Htb
symmetry Space Group: P 21 21 21
R_factor 0.175 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.976 83.881 177.461 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand 6LQ enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • protein serine/threonine kin...
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  • Primary referenceDiscovery of Novel Potent and Highly Selective Glycogen Synthase Kinase-3beta (GSK3beta) Inhibitors for Alzheimer's Disease: Design, Synthesis, and Characterization of Pyrazines., Berg S, Bergh M, Hellberg S, Hogdin K, Lo-Alfredsson Y, Soderman P, von Berg S, Weigelt T, Ormo M, Xue Y, Tucker J, Neelissen J, Jerning E, Nilsson Y, Bhat R, J Med Chem. 2012 Apr 27. PMID:22489897
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk]
  • Biological Unit Coordinates (4acg.pdb1.gz) 126 Kb
  • LPC: Ligand-Protein Contacts for 4ACG
  • CSU: Contacts of Structural Units for 4ACG
  • Structure Factors (715 Kb)
  • Retrieve 4ACG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ACG from S2C, [Save to disk]
  • Re-refined 4acg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ACG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ACG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ACG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4acg_A] [4acg_B] [4acg]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ACG: [S_TKc ] by SMART
  • Other resources with information on 4ACG
  • Community annotation for 4ACG at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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