4ADM	Lyase	date	Dec 27, 2011
title	Crystal Structure Of Rv1098c In Complex With Meso-Tartrate
authors	A.E.Mechaly, A.Haouz, I.Miras, P.Weber, W.Shepard, S.Cole, P.M.Alz M.Bellinzoni
compound		source
Molecule: Fumarate Hydratase Class II Chain: A, B, C, D Fragment: Residues 1-473 Synonym: Fumarase C Ec: 4.2.1.2 Engineered: Yes		Organism_scientific: Mycobacterium Tuberculosis Organism_taxid: 83332 Strain: H37rv Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest17
symmetry	Space Group: C 1 2 1	R_factor 0.163 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 188.940 96.490 139.650 90.00 112.44 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	GOL, SRT	enzyme	Lyase E.C.4.2.1.2 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Conformational changes upon ligand binding in the essential class II fumarase Rv1098c from Mycobacterium tuberculosis., Mechaly AE, Haouz A, Miras I, Barilone N, Weber P, Shepard W, Alzari PM, Bellinzoni M, FEBS Lett. 2012 Jun 4;586(11):1606-11. Epub 2012 May 3. PMID:22561013

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (575 Kb) [Save to disk] Biological Unit Coordinates (4adm.pdb1.gz) 565 Kb LPC: Ligand-Protein Contacts for 4ADM CSU: Contacts of Structural Units for 4ADM Structure Factors (2202 Kb) Retrieve 4ADM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4ADM from S2C, [Save to disk] Re-refined 4adm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ADM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4ADM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4ADM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4adm_A] [4adm_B] [4adm_D] [4adm_C] [4adm] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4ADM

Community annotation for 4ADM at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---