4AK0 Hormone date Feb 21, 2012
title Ligand Controlled Assembly Of Hexamers, Dihexamers, And Line Multihexamer Structures By An Engineered Acylated Insulin
authors D.B.Steensgaard, G.Schluckebier, H.M.Strauss, M.Norrman, J.K.Tho A.V.Friderichsen, S.Havelund, I.Jonassen
compound source
Molecule: Insulin A Chain
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932

Molecule: Insulin B Chain
Chain: B
Fragment: Delta B30, Residues 25-53
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
symmetry Space Group: I 21 3
R_factor 0.166 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.800 77.800 77.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.28 Å
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceLigand-Controlled Assembly of Hexamers, Dihexamers, and Linear Multihexamer Structures by the Engineered Acylated Insulin Degludec., Steensgaard DB, Schluckebier G, Strauss HM, Norrman M, Thomsen JK, Friderichsen AV, Havelund S, Jonassen I, Biochemistry. 2013 Jan 3. PMID:23256685
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (4ak0.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 4AK0
  • Structure Factors (48 Kb)
  • Retrieve 4AK0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AK0 from S2C, [Save to disk]
  • Re-refined 4ak0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AK0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AK0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AK0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ak0_A] [4ak0_B] [4ak0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4AK0: [IlGF ] by SMART
  • Other resources with information on 4AK0
  • Community annotation for 4AK0 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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