4ANQ Transferase date Mar 21, 2012
title Structure Of G1269a Mutant Anaplastic Lymphoma Kinase In Com Crizotinib
authors M.Mctigue, Y.Deng, W.Liu, A.Brooun
compound source
Molecule: Alk Tyrosine Kinase Receptor
Chain: A
Fragment: Kinase, Residues 1093-1411
Synonym: Anaplastic Lymphoma Kinase, Cd246
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbac1
symmetry Space Group: P 21 21 21
R_factor 0.201 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.626 57.473 104.617 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.76 Å
ligand VGH enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe design of potent and selective inhibitors to overcome clinical ALK mutations resistant to crizotinib., Huang Q, Johnson TW, Bailey S, Brooun A, Bunker KD, Burke BJ, Collins MR, Cook A, Cui JJ, Dack KN, Deal JG, Deng YL, Dinh DM, Engstrom LD, He M, Hoffman J, Hoffman RL, Shen H, Johnson P, Kania RS, Lam H, Lam JL, Le P, Li Q, Lingardo L, Liu W, West Lu M, McTigue MA, Palmer CL, Richardson PF, Sach NW, Smeal T, Smith GL, Stewart AE, Timofeevski SL, Tsaparikos K, Wang H, Zhu H, Zhu J, Zou HY, Edwards M, J Med Chem. 2014 Jan 16. PMID:24432909
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4anq.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 4ANQ
  • CSU: Contacts of Structural Units for 4ANQ
  • Structure Factors (224 Kb)
  • Retrieve 4ANQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ANQ from S2C, [Save to disk]
  • Re-refined 4anq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ANQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ANQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ANQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4anq_A] [4anq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ANQ: [TyrKc ] by SMART
  • Other resources with information on 4ANQ
  • Community annotation for 4ANQ at PDBWiki (http://pdbwiki.org)

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