4ASS Structural Protein Dna date May 02, 2012
title Tubr Bound To Tubc - 26 Bp - From Bacillus Thuringiensis Ser Israelensis Pbtoxis
authors C.H.S.Aylett, J.Lowe
compound source
Molecule: Tubr From Bacillus Thuringiensis Pbtoxis
Chain: A, B, C, D, E, F, G, H, I
Engineered: Yes
Organism_scientific: Bacillus Thuringiensis
Organism_taxid: 1428
Strain: Serovar Israelensis
Atcc: 35646
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_variant: C41
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phis17

Molecule: Tubc From Bacillus Thuringiensis Pbtoxis 26 Bp
Chain: Y
Fragment: Sense Strand
Engineered: Yes

Synthetic: Yes
Organism_scientific: Bacillus Thuringiensis
Organism_taxid: 1428

Molecule: Tubc From Bacillus Thuringiensis Pbtoxis 26 Bp
Chain: Z
Fragment: Antisense Strand
Engineered: Yes

Synthetic: Yes
Organism_scientific: Bacillus Thuringiensis
Organism_taxid: 1428
symmetry Space Group: I 2 2 2
R_factor 0.408 R_Free 0.484
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.561 162.352 285.394 90.00 90.00 90.00
method X-Ray Diffractionresolution 7.00 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, I, G


Primary referenceSuperstructure of the centromeric complex of TubZRC plasmid partitioning systems., Aylett CH, Lowe J, Proc Natl Acad Sci U S A. 2012 Oct 9;109(41):16522-7. doi:, 10.1073/pnas.1210899109. Epub 2012 Sep 25. PMID:23010931
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk]
  • Biological Unit Coordinates (4ass.pdb1.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 4ASS
  • CSU: Contacts of Structural Units for 4ASS
  • Structure Factors (170 Kb)
  • Retrieve 4ASS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ASS from S2C, [Save to disk]
  • Re-refined 4ass structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ASS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ASS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ASS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ass] [4ass_G] [4ass_I] [4ass_F] [4ass_Z] [4ass_Y] [4ass_A] [4ass_C] [4ass_B] [4ass_H] [4ass_D] [4ass_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ASS
  • Community annotation for 4ASS at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
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