4ATQ	Transferase	date	May 09, 2012
title	Gaba-Transaminase A1r958 In Complex With External Aldimine P Adduct
authors	H.Bruce, A.N.Tuan, J.Mangas Sanchez, S.Hart, J.P.Turkenburg, G.Gr
compound		source
Molecule: 4-Aminobutyrate Transaminase Chain: A, B, C, D, E, F, G, H, I, J, K, L Synonym: A1r958 Transaminase Ec: 2.6.1.19 Engineered: Yes Other_details: Covalent Link Between Side Chan Of Lys295 An Aldehydic Carbon Of Plp		Organism_scientific: Arthrobacter Aurescens Organism_taxid: 290340 Strain: Tc1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-Ysblic-3c Other_details: Genomic Dna From Atcc
symmetry	Space Group: P 21 21 2	R_factor 0.202 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 176.710 292.830 105.960 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.75 Å
ligand	ABU, PLP	enzyme	Transferase E.C.2.6.1.19 BRENDA
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L
Primary reference	Structures of a gamma-aminobutyrate (GABA) transaminase from the s-triazine-degrading organism Arthrobacter aurescens TC1 in complex with PLP and with its external aldimine PLP-GABA adduct., Bruce H, Nguyen Tuan A, Mangas Sanchez J, Leese C, Hopwood J, Hyde R, Hart S, Turkenburg JP, Grogan G, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Oct 1;68(Pt 10):1175-80., doi: 10.1107/S1744309112030023. Epub 2012 Sep 29. PMID:23027742

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (769 Kb) [Save to disk] Biological Unit Coordinates (4atq.pdb1.gz) 266 Kb Biological Unit Coordinates (4atq.pdb2.gz) 263 Kb Biological Unit Coordinates (4atq.pdb3.gz) 250 Kb LPC: Ligand-Protein Contacts for 4ATQ CSU: Contacts of Structural Units for 4ATQ Structure Factors (5987 Kb) Retrieve 4ATQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4ATQ from S2C, [Save to disk] Re-refined 4atq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ATQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4ATQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4ATQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4atq] [4atq_D] [4atq_K] [4atq_A] [4atq_B] [4atq_G] [4atq_H] [4atq_I] [4atq_F] [4atq_E] [4atq_C] [4atq_L] [4atq_J] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4ATQ

Community annotation for 4ATQ at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---