4AUI Membrane Protein date May 17, 2012
title Structure And Function Of The Porb Porin From Disseminating Gonorrhoeae
authors K.Zeth, V.Kozjak-Pavlovic, M.Faulstich, R.Hurwitz, O.Kepp, T.Rude
compound source
Molecule: Porin (Porb)
Chain: A, B, C
Organism_scientific: Neisseria Gonorrhoeae
Organism_taxid: 485

Molecule: Poly Ala
Chain: D, E, F

Organism_scientific: Neisseria Gonorrhoeae
Organism_taxid: 485
symmetry Space Group: C 1 2 1
R_factor 0.221 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.050 111.470 88.340 90.00 102.07 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand ATP, MG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure and function of the PorB porin from disseminating N. gonorrhoeae., Zeth K, Kozjak-Pavlovic V, Faulstich M, Fraunholz M, Hurwitz R, Kepp O, Rudel T, Biochem J. 2012 Oct 25. PMID:23095086
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (316 Kb) [Save to disk]
  • Biological Unit Coordinates (4aui.pdb1.gz) 304 Kb
  • Biological Unit Coordinates (4aui.pdb2.gz) 4 Kb
  • Biological Unit Coordinates (4aui.pdb3.gz) 4 Kb
  • Biological Unit Coordinates (4aui.pdb4.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 4AUI
  • CSU: Contacts of Structural Units for 4AUI
  • Structure Factors (118 Kb)
  • Retrieve 4AUI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AUI from S2C, [Save to disk]
  • Re-refined 4aui structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AUI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AUI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AUI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4aui] [4aui_D] [4aui_E] [4aui_F] [4aui_B] [4aui_C] [4aui_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4AUI
  • Community annotation for 4AUI at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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