4AXD	Transferase	date	Jun 12, 2012
title	Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase In Complex Wit
authors	J.I Banos-Sanz, J.Sanz-Aparicio, B.Gonzalez
compound		source
Molecule: Inositol-Pentakisphosphate 2-Kinase Chain: A Synonym: 2.7.1.158, Inositol-1\,3\,4\,5\,6-Pentakisphosphat Kinase, Ins(1\,3\,4\,5\,6)P5 2-Kinase, Atipk1, Insp5 2-Kina Ec: 2.7.1.158 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Thale Cress Organism_taxid: 3702 Expression_system: Eschericia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta Plyss Expression_system_vector_type: Plasmid Expression_system_vector: Pklslt
symmetry	Space Group: P 21 21 2	R_factor 0.194 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 100.230 71.800 63.060 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.05 Å
ligand	ANP, CIT, SO4, ZN	enzyme	Transferase E.C.2.7.1.158 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Conformational Changes in Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase upon Substrate Binding: ROLE OF N-TERMINAL LOBE AND ENANTIOMERIC SUBSTRATE PREFERENCE., Banos-Sanz JI, Sanz-Aparicio J, Whitfield H, Hamilton C, Brearley CA, Gonzalez B, J Biol Chem. 2012 Aug 24;287(35):29237-49. Epub 2012 Jun 28. PMID:22745128

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (4axd.pdb1.gz) 152 Kb LPC: Ligand-Protein Contacts for 4AXD CSU: Contacts of Structural Units for 4AXD Structure Factors (416 Kb) Retrieve 4AXD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4AXD from S2C, [Save to disk] Re-refined 4axd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4AXD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4AXD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4AXD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4axd_A] [4axd] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4AXD

Community annotation for 4AXD at PDBWiki (http://pdbwiki.org)

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