4AXP Cell Adhesion date Jun 13, 2012
title Nmr Structure Of Hsp12, A Protein Induced By And Required Fo Restriction-Induced Lifespan Extension In Yeast.
authors A.P.Herbert, M.Riesen, L.Bloxam, E.Kosmidou, B.M.Wareing, J.R.Joh M.M.Phelan, S.R.Pennington, L.Y.Lian, A.Morgan
compound source
Molecule: 12 Kda Heat Shock Protein
Chain: A
Synonym: Hsp12, Glucose And Lipid-Regulated Protein
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Atcc: 204508
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pe-Sumo-Pro-Kan
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of hsp12, a protein induced by and required for dietary restriction-induced lifespan extension in yeast., Herbert AP, Riesen M, Bloxam L, Kosmidou E, Wareing BM, Johnson JR, Phelan MM, Pennington SR, Lian LY, Morgan A, PLoS One. 2012;7(7):e41975. Epub 2012 Jul 27. PMID:22848679
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (569 Kb) [Save to disk]
  • Biological Unit Coordinates (4axp.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 4AXP
  • Original NMR restraints for 4AXP from PDB
  • Retrieve 4AXP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AXP from S2C, [Save to disk]
  • View 4AXP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AXP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AXP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4axp] [4axp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4AXP
  • Community annotation for 4AXP at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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