4BG6 Signaling Protein date Mar 23, 2013
title 14-3-3 Interaction With Rnd3 Prenyl-Phosphorylation Motif
authors P.Riou, S.Kjaer, A.Purkiss, N.O'Reilly, N.Q.Mcdonald
compound source
Molecule: 14-3-3 Protein Zetadelta
Chain: A, B
Synonym: Protein Kinase C Inhibitor Protein 1, Kcip-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Star

Molecule: Rho-Related Gtp-Binding Protein Rhoe
Chain: Q, R
Fragment: C-Terminus, Residues 232-241
Synonym: Protein Memb, Rho Family Gtpase 3, Rho-Related Gtp Protein Rho8, Rnd3;
Engineered: Yes
Other_details: Farnesylation On Cys 347

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.244 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.783 81.313 111.189 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand FAR, PE4, SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • positive regulation of prote...

  • Primary reference14-3-3 proteins interact with a hybrid prenyl-phosphorylation motif to inhibit g proteins., Riou P, Kjaer S, Garg R, Purkiss A, George R, Cain RJ, Bineva G, Reymond N, McColl B, Thompson AJ, O'Reilly N, McDonald NQ, Parker PJ, Ridley AJ, Cell. 2013 Apr 25;153(3):640-53. doi: 10.1016/j.cell.2013.03.044. PMID:23622247
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (159 Kb) [Save to disk]
  • Biological Unit Coordinates (4bg6.pdb1.gz) 152 Kb
  • LPC: Ligand-Protein Contacts for 4BG6
  • CSU: Contacts of Structural Units for 4BG6
  • Structure Factors (352 Kb)
  • Retrieve 4BG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BG6 from S2C, [Save to disk]
  • Re-refined 4bg6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BG6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BG6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bg6_A] [4bg6] [4bg6_Q] [4bg6_R] [4bg6_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BG6: [14_3_3 ] by SMART
  • Other resources with information on 4BG6
  • Community annotation for 4BG6 at PDBWiki (http://pdbwiki.org)

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