4BL5	Oxidoreductase	date	May 01, 2013
title	Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Product Gdp-L-Fucose
authors	M.Vollmar, N.Shafqat, A.Rojkova, T.Krojer, A.Bradley, J.W.Raynor, K.Kavanagh, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, U.Oppermann, W.W.Yue
compound		source
Molecule: Gdp-L-Fucose Synthase Chain: A, B, C, D, E, F, G, H, I, J, K, L Synonym: Gdp-4-Keto-6-Deoxy-D-Mannose-3,5-Epimerase-4-Reduc Protein Fx, Red Cell Nadp(H)-Binding Protein, Short-Chain Dehydrogenasereductase Family 4e Member 1; Ec: 1.1.1.271 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 1	R_factor 0.222 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.407 90.478 147.518 72.54 72.64 60.14
method	X-Ray Diffraction	resolution	2.60 Å
ligand	EDO, GFB, NAP	enzyme	Oxidoreductase E.C.1.1.1.271 BRENDA
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L electron transfer activity

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1229 Kb) [Save to disk] Biological Unit Coordinates (4bl5.pdb1.gz) 211 Kb Biological Unit Coordinates (4bl5.pdb2.gz) 209 Kb Biological Unit Coordinates (4bl5.pdb3.gz) 212 Kb Biological Unit Coordinates (4bl5.pdb4.gz) 209 Kb Biological Unit Coordinates (4bl5.pdb5.gz) 211 Kb Biological Unit Coordinates (4bl5.pdb6.gz) 210 Kb LPC: Ligand-Protein Contacts for 4BL5 CSU: Contacts of Structural Units for 4BL5 Structure Factors (4207 Kb) Retrieve 4BL5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BL5 from S2C, [Save to disk] Re-refined 4bl5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BL5 in 3D

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Visual 3D analysis of 4BL5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BL5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bl5_B] [4bl5_C] [4bl5_L] [4bl5_H] [4bl5_J] [4bl5_D] [4bl5_F] [4bl5_K] [4bl5_A] [4bl5_G] [4bl5] [4bl5_E] [4bl5_I] SWISS-PROT database: Domain organization of by SWISSPFAM

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