4BLV	Transferase	date	May 04, 2013
title	Crystal Structure Of Escherichia Coli 23s Rrna (A2030-N6)- Methyltransferase Rlmj In Complex With S-Adenosylmethionine
authors	A.S.Punekar, J.Liljeruhm, T.R.Shepherd, A.C.Forster, M.Selmer
compound		source
Molecule: Ribosomal Rna Large Subunit Methyltransferase J Chain: A, B Ec: 2.1.1.266 Engineered: Yes Other_details: Specifically Monomethylates The Adenine In P 2030 Of 23s Rrna		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K-12 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pexp5-Cttopo
symmetry	Space Group: P 1 21 1	R_factor 0.170 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.680 77.570 82.700 90.00 103.50 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	EDO, GOL, PEG, SAM, SO4	enzyme	Transferase E.C.2.1.1.266 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural and functional insights into the molecular mechanism of rRNA m6A methyltransferase RlmJ., Punekar AS, Liljeruhm J, Shepherd TR, Forster AC, Selmer M, Nucleic Acids Res. 2013 Aug 13. PMID:23945937

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk] Biological Unit Coordinates (4blv.pdb1.gz) 54 Kb Biological Unit Coordinates (4blv.pdb2.gz) 53 Kb LPC: Ligand-Protein Contacts for 4BLV CSU: Contacts of Structural Units for 4BLV Structure Factors (299 Kb) Retrieve 4BLV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BLV from S2C, [Save to disk] Re-refined 4blv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BLV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4BLV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BLV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4blv_A] [4blv] [4blv_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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