4BN4	Hydrolase	date	May 13, 2013
title	Structure Of Human Sirt3 In Complex With Adp-Ribose
authors	G.T.T.Nguyen, S.Schaefer, M.Gertz, M.Weyand, C.Steegborn
compound		source
Molecule: Nad-Dependent Protein Deacetylase Sirtuin-3, Mito Chain: A Fragment: Residues 116-399 Synonym: Hsirt3, Regulatory Protein Sir2 Homolog 3, Sir2-Li 3; Ec: 3.5.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pvft3s
symmetry	Space Group: P 21 21 21	R_factor 0.138 R_Free 0.180
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.900 66.670 66.850 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	AR6, NA, OP2, ZN	enzyme	Hydrolase E.C.3.5.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structures of human sirtuin 3 complexes with ADP-ribose and with carba-NAD(+) and SRT1720: binding details and inhibition mechanism., Nguyen GT, Schaefer S, Gertz M, Weyand M, Steegborn C, Acta Crystallogr D Biol Crystallogr. 2013 Aug;69(Pt 8):1423-32. doi:, 10.1107/S0907444913015448. Epub 2013 Jul 17. PMID:23897466

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (197 Kb) [Save to disk] Biological Unit Coordinates (4bn4.pdb1.gz) 191 Kb LPC: Ligand-Protein Contacts for 4BN4 CSU: Contacts of Structural Units for 4BN4 Structure Factors (495 Kb) Retrieve 4BN4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BN4 from S2C, [Save to disk] Re-refined 4bn4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BN4 in 3D

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Visual 3D analysis of 4BN4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BN4, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bn4] [4bn4_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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