4BRI	Hydrolase	date	Jun 04, 2013
title	Legionella Pneumophila Ntpdase1 Crystal Form II (Closed) In Complex With Mg Umppnp
authors	M.Zebisch, P.Schaefer, P.Lauble, N.Straeter
compound		source
Molecule: Ectonucleoside Triphosphate Diphosphohydrolase I Chain: A, B Synonym: Ntpdase1 Ec: 3.6.1.5 Engineered: Yes		Organism_scientific: Legionella Pneumophila Organism_taxid: 446 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.16375 R_Free 0.18452
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.457 86.411 72.186 90.00 106.53 90.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand	CL, MES, MG, UNP	enzyme	Hydrolase E.C.3.6.1.5 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystallographic Snapshots along the Reaction Pathway of Nucleoside Triphosphate Diphosphohydrolases., Zebisch M, Krauss M, Schafer P, Lauble P, Strater N, Structure. 2013 Jul 2. pii: S0969-2126(13)00200-1. doi:, 10.1016/j.str.2013.05.016. PMID:23830739

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk] Biological Unit Coordinates (4bri.pdb1.gz) 252 Kb LPC: Ligand-Protein Contacts for 4BRI CSU: Contacts of Structural Units for 4BRI Structure Factors (1024 Kb) Retrieve 4BRI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BRI from S2C, [Save to disk] Re-refined 4bri structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BRI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4BRI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BRI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bri_B] [4bri] [4bri_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4BRI

Community annotation for 4BRI at PDBWiki (http://pdbwiki.org)

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