4BTE DJ-1 Cu(I) complex date
authors Puno, M.R.A., Odell, M., Moody, P.C.E.
compound source
symmetry
R_factor
R_Free 0.14981
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.38
ligand CU1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • transcription coactivator ac...
  • peroxiredoxin activity
  • glyoxalase (glycolic acid-fo...
  • synaptic transmission, dopam...
  • negative regulation of prote...
  • positive regulation of pepti...
  • dopamine uptake involved in ...
  • positive regulation of L-dop...

  • Primary referenceStructure of Cu(I)-Bound DJ-1 Reveals a Biscysteinate Metal Binding Site at the Homodimer Interface: Insights into Mutational Inactivation of DJ-1 in Parkinsonism., Puno MR, Patel NA, Moller SG, Robinson CV, Moody PC, Odell M, J Am Chem Soc. 2013 Oct 21. PMID:24144264
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (4bte.pdb1.gz) 128 Kb
  • LPC: Ligand-Protein Contacts for 4BTE
  • CSU: Contacts of Structural Units for 4BTE
  • Structure Factors (1659 Kb)
  • Retrieve 4BTE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BTE from S2C, [Save to disk]
  • Re-refined 4bte structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BTE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BTE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BTE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bte_A] [4bte]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BTE
  • Community annotation for 4BTE at PDBWiki (http://pdbwiki.org)

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