4BV3 CRYSTAL STRUCTURE OF SIRT3 IN COMPLEX WITH THE INHIBITOR EX-527 AND NAD date
authors Gertz, M., Nguyen, N.T.T., Weyand, M., Steegborn, C.
compound source
symmetry
R_factor
R_Free 0.20942
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand APR, CL, GOL, NA, NAD, NO3, OCZ, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEx-527 inhibits Sirtuins by exploiting their unique NAD+-dependent deacetylation mechanism., Gertz M, Fischer F, Nguyen GT, Lakshminarasimhan M, Schutkowski M, Weyand M, Steegborn C, Proc Natl Acad Sci U S A. 2013 Jul 9. PMID:23840057
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (4bv3.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 4BV3
  • CSU: Contacts of Structural Units for 4BV3
  • Structure Factors (135 Kb)
  • Retrieve 4BV3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BV3 from S2C, [Save to disk]
  • Re-refined 4bv3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BV3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BV3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BV3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bv3_A] [4bv3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BV3
  • Community annotation for 4BV3 at PDBWiki (http://pdbwiki.org)

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