4BVU Structure of Shigella effector OspG in complex with host UbcH5c- Ubiquitin conjugate date
authors Pruneda, J.N., LeTrong, I., Stenkamp, R.E., Klevit, R.E., Brzovic, P.S.
compound source
symmetry
R_factor
R_Free 0.29062
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceE2~Ub conjugates regulate the kinase activity of Shigella effector OspG during pathogenesis., Pruneda JN, Smith FD, Daurie A, Swaney DL, Villen J, Scott JD, Stadnyk AW, Le Trong I, Stenkamp RE, Klevit RE, Rohde JR, Brzovic PS, EMBO J. 2014 Jan 20. PMID:24446487
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (4bvu.pdb1.gz) 63 Kb
  • CSU: Contacts of Structural Units for 4BVU
  • Structure Factors (631 Kb)
  • Retrieve 4BVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BVU from S2C, [Save to disk]
  • Re-refined 4bvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BVU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BVU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bvu_B] [4bvu_A] [4bvu_C] [4bvu]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4BVU: [UBCc] [UBQ ] by SMART
  • Other resources with information on 4BVU
  • Community annotation for 4BVU at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science