4BWQ Crystal structure of U5-15kD in a complex with PQBP1 date
authors Mizuguchi, M., Obita, T., Serita, T., Kojima, R., Morimoto, T., Nabeshima, Y., Okazawa, H.
compound source
symmetry
R_factor
R_Free 0.2520
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
Gene
Ontology
ChainFunctionProcessComponent
A, C, G, E


Primary referenceMutations in the PQBP1 gene prevent its interaction with the spliceosomal protein U5-15kD., Mizuguchi M, Obita T, Serita T, Kojima R, Nabeshima Y, Okazawa H, Nat Commun. 2014 Apr 30;5:3822. doi: 10.1038/ncomms4822. PMID:24781215
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (4bwq.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (4bwq.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (4bwq.pdb3.gz) 53 Kb
  • Biological Unit Coordinates (4bwq.pdb4.gz) 53 Kb
  • CSU: Contacts of Structural Units for 4BWQ
  • Structure Factors (2218 Kb)
  • Retrieve 4BWQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BWQ from S2C, [Save to disk]
  • Re-refined 4bwq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4BWQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4BWQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BWQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bwq_B] [4bwq_C] [4bwq_E] [4bwq_D] [4bwq_G] [4bwq_A] [4bwq_H] [4bwq_F] [4bwq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BWQ: [DIM1 ] by SMART
    • Other resources with information on 4BWQ
  • Community annotation for 4BWQ at PDBWiki (http://pdbwiki.org)

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