4CBT Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease date
authors Burli, R.W., Luckhurst, C.A., Aziz, O., Matthews, K.L., Yates, D., Lyons, K.A., Beconi, M., McAllister, G., Breccia, P., Stott, A.J., Penrose, S.D., Wall, M., Lamers, M., Leonard, P., Mueller, I., Richardson, C.M., Jarvis, R., Stones, L., Hughes, S., Wishart, G., Haughan, A.F., Connell, C.O., Mead, T., McNeil, H., Vann, J., Mangette, J., Maillard, M., Beaumont, V., Munoz-Sanjuan, I., Dominguez, C.
compound source
symmetry
R_factor
R_Free 0.27335
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.03
ligand 9F4, ZN enzyme
Primary referenceDesign, synthesis, and biological evaluation of potent and selective Class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease., Burli RW, Luckhurst CA, Aziz O, Matthews KL, Yates D, Lyons KA, Beconi M, McAllister G, Breccia P, Stott AJ, Penrose SD, Wall M, Lamers MB, Leonard P, Mueller I, Richardson CM, Jarvis R, Stones L, Hughes S, Wishart G, Haughan AF, O'Connell C, Mead T, McNeil H, Vann J, Mangette J, Maillard M, Beaumont V, Munoz-Sanjuan I, Dominguez C, J Med Chem. 2013 Nov 21. PMID:24261862
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (4cbt.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (4cbt.pdb2.gz) 56 Kb
  • Biological Unit Coordinates (4cbt.pdb3.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 4CBT
  • CSU: Contacts of Structural Units for 4CBT
  • Structure Factors (405 Kb)
  • Retrieve 4CBT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CBT from S2C, [Save to disk]
  • Re-refined 4cbt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CBT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CBT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CBT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cbt_C] [4cbt] [4cbt_A] [4cbt_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4CBT
  • Community annotation for 4CBT at PDBWiki (http://pdbwiki.org)

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