4CEV Hydrolase date Mar 15, 1999
title Arginase From Bacillus Caldevelox, L-Ornithine Complex
authors M.C.Bewley, P.D.Jeffrey, M.L.Patchett, Z.F.Kanyo, E.N.Baker
compound source
Molecule: Protein (Arginase)
Chain: A, B, C, D, E, F
Ec: 3.5.3.1
Engineered: Yes
Organism_scientific: Bacillus Caldovelox
Organism_taxid: 33931
Strain: Bacillus Species Dsm 411
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21
Other_details: Bacillus Species Dsm 411
symmetry Space Group: C 2 2 21
R_factor 0.203 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.600 277.300 139.700 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand GAI, MN, ORN enzyme Hydrolase E.C.3.5.3.1 BRENDA
related structures by homologous chain: 5CEV
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceCrystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily., Bewley MC, Jeffrey PD, Patchett ML, Kanyo ZF, Baker EN, Structure Fold Des 1999 Apr 15;7(4):435-48. PMID:10196128
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk]
  • Biological Unit Coordinates (4cev.pdb1.gz) 364 Kb
  • Biological Unit Coordinates (4cev.pdb2.gz) 274 Kb
  • LPC: Ligand-Protein Contacts for 4CEV
  • CSU: Contacts of Structural Units for 4CEV
  • Likely Quarternary Molecular Structure file(s) for 4CEV
  • Retrieve 4CEV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CEV from S2C, [Save to disk]
  • View 4CEV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CEV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CEV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4ceva_, region A [Jmol] [rasmolscript] [script source]
        - Domain d4cevb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d4cevc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d4cevd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d4ceve_, region E [Jmol] [rasmolscript] [script source]
        - Domain d4cevf_, region F [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cev] [4cev_E] [4cev_C] [4cev_D] [4cev_A] [4cev_F] [4cev_B]
  • SWISS-PROT database: [P53608]
  • Domain organization of [ARGI_BACCD] by SWISSPFAM
  • Other resources with information on 4CEV
  • Community annotation for 4CEV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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