4CMQ Crystal structure of Mn-bound S.pyogenes Cas9 date
authors Jinek, M., Jiang, F., Taylor, D.W., Sternberg, S.H., Kaya, E., Ma, E., Anders, C., Hauer, M., Zhou, K., Lin, S., Kaplan, M., Iavarone, A.T., Charpentier, E., Nogales, E., Doudna, J.A.
compound source
symmetry
R_factor
R_Free 0.2771
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.09
ligand MN, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nuclease activity
  • endonuclease activity
  • exonuclease activity
  • 3'-5' exonuclease activity


  • Primary referenceStructures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation., Jinek M, Jiang F, Taylor DW, Sternberg SH, Kaya E, Ma E, Anders C, Hauer M, Zhou K, Lin S, Kaplan M, Iavarone AT, Charpentier E, Nogales E, Doudna JA, Science. 2014 Feb 6. PMID:24505130
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (777 Kb) [Save to disk]
  • Biological Unit Coordinates (4cmq.pdb1.gz) 384 Kb
  • Biological Unit Coordinates (4cmq.pdb2.gz) 390 Kb
  • LPC: Ligand-Protein Contacts for 4CMQ
  • CSU: Contacts of Structural Units for 4CMQ
  • Structure Factors (506 Kb)
  • Retrieve 4CMQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CMQ from S2C, [Save to disk]
  • Re-refined 4cmq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CMQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CMQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CMQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cmq_A] [4cmq] [4cmq_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4CMQ: [HNHc ] by SMART
  • Other resources with information on 4CMQ
  • Community annotation for 4CMQ at PDBWiki (http://pdbwiki.org)

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