4CQ8 Plasmodium falciparum dihydroorotate dehydrogenase (DHODH) in complex with Genz-669178 date
authors Rowland, P.
compound source
symmetry
R_factor
R_Free 0.1901
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.98
ligand FMN, JBW, ORO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIn Vitro Resistance Selections for Plasmodium falciparum Dihydroorotate Dehydrogenase Inhibitors give Mutants with Multiple Point Mutations in the Drug-Binding Site and Altered Growth., Ross LS, Javier Gamo F, Lafuente-Monasterio MJ, Singh OM, Rowland P, Wiegand RC, Wirth DF, J Biol Chem. 2014 Apr 29. PMID:24782313
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (275 Kb) [Save to disk]
  • Biological Unit Coordinates (4cq8.pdb1.gz) 137 Kb
  • Biological Unit Coordinates (4cq8.pdb2.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 4CQ8
  • CSU: Contacts of Structural Units for 4CQ8
  • Structure Factors (741 Kb)
  • Retrieve 4CQ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CQ8 from S2C, [Save to disk]
  • Re-refined 4cq8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CQ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CQ8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CQ8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cq8_B] [4cq8_A] [4cq8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4CQ8
  • Community annotation for 4CQ8 at PDBWiki (http://pdbwiki.org)

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