4CSR High resolution crystal structure of the histone fold dimer (NF-YB)-(NF-YC) date
authors Gnesutta, N., Cocolo, S., Mantovani, R., Bolognesi, M., Nardini, M.
compound source
symmetry
R_factor
R_Free 0.18432
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceSequence-Specific Transcription Factor NF-Y Displays Histone-like DNA Binding and H2B-like Ubiquitination., Nardini M, Gnesutta N, Donati G, Gatta R, Forni C, Fossati A, Vonrhein C, Moras D, Romier C, Bolognesi M, Mantovani R, Cell. 2013 Jan 17;152(1-2):132-43. doi: 10.1016/j.cell.2012.11.047. PMID:23332751
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (4csr.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 4CSR
  • CSU: Contacts of Structural Units for 4CSR
  • Structure Factors (578 Kb)
  • Retrieve 4CSR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CSR from S2C, [Save to disk]
  • Re-refined 4csr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CSR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CSR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CSR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4csr_A] [4csr] [4csr_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4CSR
  • Community annotation for 4CSR at PDBWiki (http://pdbwiki.org)

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