4DQK Crystal structure of the FAD binding domain of cytochrome P450 BM3 date 2012-02-16
authors Joyce, M.G., Leys, D.
compound source
symmetry
R_factor
R_Free 0.25647
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand FAD, PG4, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of the FAD/NADPH binding domain of flavocytochrome P450 BM3., Gordon Joyce M, Ekanem IS, Roitel O, Dunford AJ, Neeli R, Girvan HM, Baker GJ, Curtis RA, Munro AW, Leys D, FEBS J. 2012 Feb 22. doi: 10.1111/j.1742-4658.2012.08544.x. PMID:22356131
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (4dqk.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (4dqk.pdb2.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 4DQK
  • CSU: Contacts of Structural Units for 4DQK
  • Structure Factors (884 Kb)
  • Retrieve 4DQK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DQK from S2C, [Save to disk]
  • Re-refined 4dqk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DQK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4DQK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4DQK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dqk_A] [4dqk_B] [4dqk]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4DQK
  • Community annotation for 4DQK at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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