4E2I The Complex Structure of the SV40 Helicase Large T Antigen and p68 Subunit of DNA Polymerase Alpha-Primase date 2012-03-08
authors Zhou, B., Arnett, D.R., Yu, X., Brewster, A., Sowd, G.A., Xie, C.L., Vila, S., Gai, D., Fanning, E., Chen, X.S.
compound source
symmetry
R_factor
R_Free 0.3139
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 5.00
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceStructural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase alpha-primase., Zhou B, Arnett DR, Yu X, Brewster A, Sowd GA, Xie CL, Vila S, Gai D, Fanning E, Chen XS, J Biol Chem. 2012 Aug 3;287(32):26854-66. doi: 10.1074/jbc.M112.363655. Epub 2012, Jun 14. PMID:22700977
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (707 Kb) [Save to disk]
  • Biological Unit Coordinates (4e2i.pdb1.gz) 359 Kb
  • Biological Unit Coordinates (4e2i.pdb2.gz) 351 Kb
  • LPC: Ligand-Protein Contacts for 4E2I
  • CSU: Contacts of Structural Units for 4E2I
  • Structure Factors (428 Kb)
  • Retrieve 4E2I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4E2I from S2C, [Save to disk]
  • Re-refined 4e2i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4E2I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4E2I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4E2I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4e2i_9] [4e2i_4] [4e2i_C] [4e2i_G] [4e2i_K] [4e2i_I] [4e2i_B] [4e2i_2] [4e2i_3] [4e2i_1] [4e2i_8] [4e2i_F] [4e2i_A] [4e2i_7] [4e2i_6] [4e2i_W] [4e2i_5] [4e2i_H] [4e2i_U] [4e2i] [4e2i_J] [4e2i_E] [4e2i_D] [4e2i_L]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4E2I
  • Community annotation for 4E2I at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science