4E93 Crystal structure of human Feline Sarcoma Viral Oncogene Homologue (v-FES)in complex with TAE684 date 2012-03-20
authors Filippakopoulos, P., Salah, E., Miduturu, C.V., Fedorov, O., Cooper, C., Delft, F.von., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Gray, N.S., Knapp, S., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2379
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.84
ligand GUI BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSmall-Molecule Inhibitors of the c-Fes Protein-Tyrosine Kinase., Hellwig S, Miduturu CV, Kanda S, Zhang J, Filippakopoulos P, Salah E, Deng X, Choi HG, Zhou W, Hur W, Knapp S, Gray NS, Smithgall TE, Chem Biol. 2012 Apr 20;19(4):529-40. PMID:22520759
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (4e93.pdb1.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 4E93
  • CSU: Contacts of Structural Units for 4E93
  • Structure Factors (483 Kb)
  • Retrieve 4E93 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4E93 from S2C, [Save to disk]
  • Re-refined 4e93 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4E93 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4E93
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4E93, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4e93_A] [4e93]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4E93: [SH2] [TyrKc ] by SMART
  • Other resources with information on 4E93
  • Community annotation for 4E93 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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