4EC7 Cobra NGF in complex with lipid date
authors Jiang, T., Wang, F., Tong, Q.
compound source
symmetry
R_factor
R_Free 0.2689
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand L44 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • growth factor activity
  • metalloendopeptidase inhibit...
  • toxin activity


  • Primary referenceStructural and functional insights into lipid-bound nerve growth factors., Tong Q, Wang F, Zhou HZ, Sun HL, Song H, Shu YY, Gong Y, Zhang WT, Cai TX, Yang FQ, Tang J, Jiang T, FASEB J. 2012 Sep;26(9):3811-21. Epub 2012 May 30. PMID:22649032
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (4ec7.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 4EC7
  • CSU: Contacts of Structural Units for 4EC7
  • Structure Factors (95 Kb)
  • Retrieve 4EC7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EC7 from S2C, [Save to disk]
  • Re-refined 4ec7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EC7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EC7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EC7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ec7_A] [4ec7] [4ec7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EC7: [NGF ] by SMART
  • Other resources with information on 4EC7
  • Community annotation for 4EC7 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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