4EN2 HIV-1 Nef in complex with MHC-I cytoplasmic domain and Mu1 adaptin subunit of AP1 adaptor (second domain) date
authors Jia, X., Xiong, Y.
compound source
symmetry
R_factor
R_Free 0.25843
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.58
Gene
Ontology
ChainFunctionProcessComponent
A, M


C, B


D, E


Primary referenceStructural basis of evasion of cellular adaptive immunity by HIV-1 Nef., Jia X, Singh R, Homann S, Yang H, Guatelli J, Xiong Y, Nat Struct Mol Biol. 2012 Jun 17;19(7):701-6. doi: 10.1038/nsmb.2328. PMID:22705789
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (287 Kb) [Save to disk]
  • Biological Unit Coordinates (4en2.pdb1.gz) 137 Kb
  • Biological Unit Coordinates (4en2.pdb2.gz) 143 Kb
  • CSU: Contacts of Structural Units for 4EN2
  • Structure Factors (741 Kb)
  • Retrieve 4EN2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EN2 from S2C, [Save to disk]
  • Re-refined 4en2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EN2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EN2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EN2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4en2_B] [4en2_A] [4en2] [4en2_E] [4en2_C] [4en2_M] [4en2_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4EN2
  • Community annotation for 4EN2 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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