4ER5	Crystal structure of human DOT1L in complex with 2 molecules of EPZ004777	date
authors	Wernimont, A.K., Tempel, W., Yu, W., Scopton, A., Li, Y., Nguyen, K.T., Federation, A., Marineau, J., Qi, J., Vedadi, M., Bradner, J.E., Schapira, M., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Brown, P.J., SGC, Structural.Genomics.Consortium.
compound		source
symmetry		R_factor R_Free 0.2177
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.57
ligand	0QK, UNX BindingDB	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Catalytic site remodelling of the DOT1L methyltransferase by selective inhibitors., Yu W, Chory EJ, Wernimont AK, Tempel W, Scopton A, Federation A, Marineau JJ, Qi J, Barsyte-Lovejoy D, Yi J, Marcellus R, Iacob RE, Engen JR, Griffin C, Aman A, Wienholds E, Li F, Pineda J, Estiu G, Shatseva T, Hajian T, Al-Awar R, Dick JE, Vedadi M, Brown PJ, Arrowsmith CH, Bradner JE, Schapira M, Nat Commun. 2012;3:1288. doi: 10.1038/ncomms2304. PMID:23250418

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk] Biological Unit Coordinates (4er5.pdb1.gz) 109 Kb LPC: Ligand-Protein Contacts for 4ER5 CSU: Contacts of Structural Units for 4ER5 Structure Factors (315 Kb) Retrieve 4ER5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4ER5 from S2C, [Save to disk] Re-refined 4er5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ER5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4ER5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4ER5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4er5] [4er5_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4ER5

Community annotation for 4ER5 at PDBWiki (http://pdbwiki.org)

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Images from IMB Jena Image Library of Biological Macromolecules.

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