4EYM MAPK13 complex with inhibitor date 2012-05-01
authors Miller, C.A., Brett, T.J.
compound source
symmetry
R_factor
R_Free 0.2694
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.35
ligand 0RX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • positive regulation of inter...

  • Primary referenceIL-13-induced airway mucus production is attenuated by MAPK13 inhibition., Alevy YG, Patel AC, Romero AG, Patel DA, Tucker J, Roswit WT, Miller CA, Heier RF, Byers DE, Brett TJ, Holtzman MJ, J Clin Invest. 2012 Dec 3;122(12):4555-68. doi: 10.1172/JCI64896. Epub 2012 Nov, 26. PMID:23187130
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (4eym.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 4EYM
  • CSU: Contacts of Structural Units for 4EYM
  • Structure Factors (374 Kb)
  • Retrieve 4EYM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EYM from S2C, [Save to disk]
  • Re-refined 4eym structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EYM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EYM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EYM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4eym_A] [4eym]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EYM: [S_TKc ] by SMART
  • Other resources with information on 4EYM
  • Community annotation for 4EYM at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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