4EZ5 CDK6 (monomeric) in complex with inhibitor date
authors Chopra, R., Xu, M.
compound source
symmetry
R_factor
R_Free 0.2870
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand 0RS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFragment-Based Discovery of 7-Azabenzimidazoles as Potent, Highly Selective, and Orally Active CDK4/6 Inhibitors., Cho YS, Angove H, Brain C, Chen CH, Cheng H, Cheng R, Chopra R, Chung K, Congreve M, Dagostin C, Davis DJ, Feltell R, Giraldes J, Hiscock SD, Kim S, Kovats S, Lagu B, Lewry K, Loo A, Lu Y, Luzzio M, Maniara W, McMenamin R, Mortenson PN, Benning R, O'Reilly M, Rees DC, Shen J, Smith T, Wang Y, Williams G, Woolford AJ, Wrona W, Xu M, Yang F, Howard S, ACS Med Chem Lett. 2012 May 17;3(6):445-9. doi: 10.1021/ml200241a. eCollection, 2012 Jun 14. PMID:24900493
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (4ez5.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 4EZ5
  • CSU: Contacts of Structural Units for 4EZ5
  • Structure Factors (139 Kb)
  • Retrieve 4EZ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EZ5 from S2C, [Save to disk]
  • Re-refined 4ez5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EZ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EZ5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EZ5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ez5] [4ez5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EZ5: [S_TKc ] by SMART
  • Other resources with information on 4EZ5
  • Community annotation for 4EZ5 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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