4F1E The Crystal Structure of a Human MitoNEET mutant with Asp 67 replaced by a Gly date 2012-05-06
authors Baxter, E.I., Zuris, J.A., Wang, C., Axelrod, H.L., Cohen, A.E., Paddock, M.L., Nechushtai, R., Onuchic, J.N., Jennings, P.A.
compound source
symmetry
R_factor
R_Free 0.2272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand FES enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G


Primary referenceAllosteric control in a metalloprotein dramatically alters function., Baxter EL, Zuris JA, Wang C, Vo PL, Axelrod HL, Cohen AE, Paddock ML, Nechushtai R, Onuchic JN, Jennings PA, Proc Natl Acad Sci U S A. 2013 Jan 15;110(3):948-53. doi:, 10.1073/pnas.1208286110. Epub 2012 Dec 27. PMID:23271805
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (394 Kb) [Save to disk]
  • Biological Unit Coordinates (4f1e.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (4f1e.pdb2.gz) 47 Kb
  • Biological Unit Coordinates (4f1e.pdb3.gz) 46 Kb
  • Biological Unit Coordinates (4f1e.pdb4.gz) 47 Kb
  • Biological Unit Coordinates (4f1e.pdb5.gz) 46 Kb
  • Biological Unit Coordinates (4f1e.pdb6.gz) 46 Kb
  • Biological Unit Coordinates (4f1e.pdb7.gz) 46 Kb
  • Biological Unit Coordinates (4f1e.pdb8.gz) 45 Kb
  • Biological Unit Coordinates (4f1e.pdb9.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 4F1E
  • CSU: Contacts of Structural Units for 4F1E
  • Structure Factors (2599 Kb)
  • Retrieve 4F1E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4F1E from S2C, [Save to disk]
  • Re-refined 4f1e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4F1E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4F1E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4F1E, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4f1e_J] [4f1e_Q] [4f1e_C] [4f1e_R] [4f1e_P] [4f1e_B] [4f1e_L] [4f1e_G] [4f1e_H] [4f1e_I] [4f1e_K] [4f1e_O] [4f1e_N] [4f1e_E] [4f1e] [4f1e_D] [4f1e_A] [4f1e_F] [4f1e_M]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4F1E: [ZnF_CDGSH ] by SMART
    • Other resources with information on 4F1E
  • Community annotation for 4F1E at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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