4F3R Structure of phosphopantetheine adenylyltransferase (CBU_0288) from Coxiella burnetii date 2012-05-09
authors Franklin, M.C., Cheung, J., Rudolph, M., Cassidy, M., Gary, E., Burshteyn, F., Love, J.
compound source
symmetry
R_factor
R_Free 0.23643
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
ligand CA, MSE enzyme
Gene CBU
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural Genomics for Drug Design against the Pathogen Coxiella burnetii., Franklin MC, Cheung J, Rudolph MJ, Burshteyn F, Cassidy M, Gary E, Hillerich B, Yao ZK, Carlier PR, Totrov M, Love JD, Proteins. 2015 Jun 1. doi: 10.1002/prot.24841. PMID:26033498
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (4f3r.pdb1.gz) 151 Kb
  • Biological Unit Coordinates (4f3r.pdb2.gz) 158 Kb
  • Biological Unit Coordinates (4f3r.pdb3.gz) 153 Kb
  • Biological Unit Coordinates (4f3r.pdb4.gz) 302 Kb
  • Biological Unit Coordinates (4f3r.pdb5.gz) 315 Kb
  • LPC: Ligand-Protein Contacts for 4F3R
  • CSU: Contacts of Structural Units for 4F3R
  • Structure Factors (1364 Kb)
  • Retrieve 4F3R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4F3R from S2C, [Save to disk]
  • Re-refined 4f3r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4F3R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4F3R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4F3R, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4f3r_C] [4f3r_B] [4f3r] [4f3r_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4F3R
  • Community annotation for 4F3R at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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